Cool systems I’ve built
A recruiter-friendly work grid with expandable technical details for clinical AI, NGS QC, and translational oncology data systems.
Problem: Clinical notes contain high-value details that are difficult to reuse for research databases or review workflows.
Built: Built an MVP for extracting structured clinical information from notes or mock records with JSON validation and human-review-friendly output.
Impact: Demonstrates a practical clinical informatics path from narrative text to auditable structured data.
Problem: Homopolymer-region artifacts and flow-rate or fluidics issues can complicate variant review.
Built: Designed a dashboard framework for automated amplicon coverage monitoring, sequencing artifacts tracking, and clinical sequencing QC investigation.
Impact: Supports faster investigation of false-positive results and run-level sequencing behavior by pathologists on a no-code interface.
Problem: Variant calls from different platforms and callers rarely align cleanly for downstream clonal evolution tools.
Built: Planned a harmonization workflow for caller-specific parsing, normalization, and ML-ready tabular transformation.
Impact: Improves compatibility across sequencing workflows and downstream clonal tracking analysis.
Problem: PhIP-Seq peptide-level reactivity needs reproducible modeling to support cancer research interpretation.
Built: Created a statistical scoring framework for peptide and antigen-level reactivity in a colorectal cancer research context.
Impact: Makes antibody profiling outputs easier to compare, summarize, and investigate.
Problem: Variant review requires comparing evidence across multiple clinical and public knowledge sources.
Built: Designed an AI-assisted review pattern with ClinVar/dbSNP/COSMIC-style placeholders, evidence comparison, and human-in-the-loop summaries.
Impact: Frames a practical assistant for clinical reporting support without replacing expert review.